Monthly Archives: July 2013

Wednesday 07/31/13

Posted on July 31, 2013 by admin

9:45 A – 7:30 P, 8:00 P – 10:00 P Discussion discuss bivalent domains with Alex Schier. read Vastenhouw & Scheir review. Schier group lab meeting tomorrow 3:45 STORM finish O/N run of Ph-Wt-flag-cy7, Pc-647 start analysis of en data. … Continue reading →

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chromatin paints activator tests

Posted on July 31, 2013 by admin

Possible matches: * X-1, cy5-2 * 0-1, cy5-2 * 405-1, cy5-2 * cy5-1, cy5-2 * cy5-1, X-2 Blind-Analysis Round 0 Round 1 R1S1 0-1, cy5-2 R1S3 405-1, cy5-2 R1S4 cy5-1, X-2 R1S5 cy5-1, cy5-2 R1S6 X-1, cy5-2 Round 2 R2S1 … Continue reading →

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Tuesday 07/30/13

Posted on July 30, 2013 by admin

9:30 A – 5:00 P, 9:00 P- 12:00 P STORM set up O/N Ph-wt Pc-cy7 Modeling Using renewal equations which say fano factor of time is eta^2 of transcript count variability (covN) should go like 1/kf for all N for … Continue reading →

Posted in Summaries, Transcription Modeling | Comments Off on Tuesday 07/30/13

notes from analytical exploration of effects of chain length on mRNA variability

Posted on July 30, 2013 by admin

The details of this approach are not valid, since we require reversability to use this form for the variance. excised text from review draft: % Using Sanchez Approach Since only one state in the gestation cycle is transcriptionally competent, all … Continue reading →

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Monday 07/29/13

Posted on July 30, 2013 by admin

9:45 A – 7:00 P remotely 8:30 P – 1:00 A lab meeting see notes Journal club suggestions from XZ – if it’s not generally relevant, give big picture, not detailed results. Show multiple papers. If everyone can relate it’s … Continue reading →

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Protected: project 2, 07/29/13

Posted on July 29, 2013 by admin

There is no excerpt because this is a protected post.

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Protected: lab meeting 07/29/13

Posted on July 29, 2013 by admin

There is no excerpt because this is a protected post.

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Sunday 07/28/13

Posted on July 28, 2013 by admin

Embryo imaging continue imaging embryo En locus in En-expressing/non-expressing cells Ph-project *label new dk anti-m cy7 Review working on derivation of CoV for total mRNA levels dependence on N Inverse of tri-diagonal matrices: http://www.mat.uc.pt/preprints/ps/p0516.pdf Solving Recurrence Relations: http://www.wikihow.com/Solve-Recurrence-Relations split up … Continue reading →

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Protected: project 2, 07/26/13

Posted on July 26, 2013 by admin

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Friday 07/26/13

Posted on July 26, 2013 by admin

Project 2 see notes Embryo sequential staining checking DNA FISH stain on En-embryos locating all embryos on coverglass using 4x 488-scan. embryos successfully retained through in situ procedure. Both coverslips. yay! Imaging embryos

Posted in Summaries | Comments Off on Friday 07/26/13