Author Archives: admin

Protected: chromatin results: 09/05/14

Posted on September 5, 2014 by admin

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Protected: project 2: update 09/04/14

Posted on September 4, 2014 by admin

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Thursday 09/04/14

Posted on September 4, 2014 by admin

10:00 am – 11:30 pm Project 2 see notes (mostly a tedious debugging session). Chromatin Project, 3D interaction analysis Shown left is the the two domains color coded. Shown right, I’ve concatenated all the points from both molecule lists, and … Continue reading →

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Wednesday 09/03/14

Posted on September 3, 2014 by admin

10:00 am – 10:00 pm STORM troubleshooting storm2 lags with hazen might be due to old settings and software on the Hamamatsu “demo” computer creating issues. Hazen also troubleshoot issues with the settings file. set up STORM of L4E7. lag … Continue reading →

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Tuesday 09/02/14

Posted on September 2, 2014 by admin

10:00 am – 11:30 pm Chromatin Data Analysis troubleshooting failed drift correction using auto-correlation reprocessed all recent 2 color data working on new method of quantifying overlap — just average distance to all self points vs average distance to all … Continue reading →

Posted in Summaries | Comments Off on Tuesday 09/02/14

Monday 09/01/14

Posted on September 1, 2014 by admin

10:00 am – 3:00 pm, 10:45 pm — 12:45 am Chromatin project working on multi-channel global drift correction single channel looks great. STORMrender works, but ChromatinCropper has a shift. Fixed bug (flipped sign) in ChromatinCroppers Multi-channel drift correction. Now good. … Continue reading →

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Protected: project 2, planning

Posted on September 1, 2014 by admin

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Sunday 08/31/14

Posted on August 31, 2014 by admin

10:00 am – 11:30 pm Project 2 see post Chromatin need to fix multichannel drift correction in new version of ChromatinCropper

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Protected: project 2 update:08/31/14

Posted on August 31, 2014 by admin

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Protected: chromatin draft figures

Posted on August 30, 2014 by admin

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