Tag Archives: Ph

Protected: Ph conc effects

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Tuesday 04/01/14

10:30a – 1:20a STORM imaging Microscope computer blue-screen crash during the night on prism2 Jiang reports having seen similar issues on prism2 Presentation Prep Making slides for Friday’s team meeting with Wu group see googledocs presentation. This took the half … Continue reading

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Protected: Ph Polymerization: on modeling

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Wednesday 03/26/14

9:20a – 10:10p, remotely, 10:50p – 11:30p Goals passage cells washout probe from new multicolor stain finish updating notes from yesterday STORM run configurations data analysis launched break down PRISM2 run of L3C04. (complete) break down STORM2 run of L3C03 … Continue reading

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Tuesday 03/25/14

10:00a – 1:00a Oligo Secondaries Fixes for secondary figure use the dots only rendering method make dots only rendering method a standard plugin for matlab-storm (I rather like it) wrote function StormHist.m added to QuickPlots of matlab-functions instead, not sure … Continue reading

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Friday 03/21/14

10:30a PH project results at greater sampling depth, longer simulation time, for the current published table parameters see PH project version corresponding to current date for details. Data\2014-03-17_PhSim\PhCell_CappingModel5.mat Research Organization Reorganizing projects folder Freezer space organization started new box: Lib3 … Continue reading

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Tuesday 03/18/14

9:30a – 6:30p, 11:00p – 1:00a Oligo Secondaries work out new strategy for figure need simulations of binding density Chromatin Polymer simulations Goal: illustrate effect of localization counts * wrote new basic StickyPolymer simulation function * wrote some new polymer … Continue reading

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Sunday 03/16/14

10:30a – 6:00p Goals flip fly stocks (done) passage cells (done) scheduling christia (May 17-20) dad’s conference (April 25th) dentist (May 7th) More data processing! running splitdax on 140310_L4E4 data running bead averaging on 140310_L4E4 data analyzing averaged beads from … Continue reading

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Thursday 03/13/14

9:00a — 11:30p communication Help Jaeger student with Unsupervised_Dotfinding.m (see email) meetings planning meeting for G0 presentation jeff will embed movies got slide from Bryan got movies from Colenso put in example images of chromatin need to rehearse talk! meeting … Continue reading

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Protected: PH project update

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