9:30a – 6:30p, 11:00p – 1:00a
Oligo Secondaries
- work out new strategy for figure
- need simulations of binding density
Chromatin Polymer simulations
Goal: illustrate effect of localization counts
* wrote new basic StickyPolymer simulation function
* wrote some new polymer plotting functions
* wrote a basic (stub) binding chemistry function
* all new PolymerSim package is in matlab-functions
Figure layout
- working on figure presentation
- see protected notes
Project 2
- see protected notes
Ph Project
- drop off still a little too shallow (previously this was always too steep).
- effect on chromatin structure was more obvious with lower bond energy (higher breaking probability).