Category Archives: Chromatin

Exploring Fixation Effects 08/03/15

Confocal images of live and fixed cells with different fixation methods Using automated image processing to ID effects on chromatin structure. Time control MEOH fixed sample Experiment vs Negative control Switched from simple rescaling to feature finding using FIJI / … Continue reading

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Protected: Ph-Polymerization colocalization control

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Protected: initial heat-shock structure data

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Protected: Ph conc effects

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Protected: analysis of 5kb region for Oligo Secondaries

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Protected: chromatin modeling results

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Protected: chromatin results: 09/05/14

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Protected: chromatin draft figures

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Monday 07/14/14

10:00 am – 10:55 pm STORM imaging D11 Chromatin Project New stains L3E06 L3E07 L3E07toE09 L2 F03toF04 L2 G02toG04 New stains F3toF5 P1 + F6-P3, 2 large coverslips Chromatin overlap data rendering Models to compare Components of a random walk … Continue reading

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Thusday 07/03/14

9:50 am – 7:30 pm coding found and fixed bug in ClusterStats.m Sequential hybes blead-back in of probe signal: probably a sign of not sufficiently sealed chamber. Try air drying sample and then sealing really tight. hybe2 stain initially very … Continue reading

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