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Category Archives: Microscopy
Sunday 11/06/11
10A – 11:45A, 2:ooP-4:00P, 6:00P-11:50P Turnkey 60x works alright for mitotic sorting of DAPI staged embryos — constructed large well coverslip with channels for removing excess buffer. In mininmal buffer embryos don’t float around and are easier to pick off … Continue reading
Posted in Microscopy, Summaries
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Saturday 11/05/11
2:30 P — 6:45 P chambered slides work well for checking and tracking single embryos. H3K4 works, PolII has sharp background spots but no obvious nuclear stain. Post-fix embryos and then rinse and then do sorting, prior to ethanol and … Continue reading
Posted in Microscopy, Summaries
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Protected: Issues with detection sensitivity
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Posted in Microscopy, Shadow Enhancers
Tagged controls, mRNA counting, sna, y-BAC
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Protected: MP09 intensity sensitivity
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Posted in AP patterning, Microscopy, Shadow Enhancers
Tagged bcd, controls, hb, mRNA counting, shadow enhancers
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mRNA counting control
Double labeling, raw image (left), and competition labeling, raw image (right) Images are max-projects through the z-dimension. hatches mark dotfinder located centroids. Yellow stars mark mRNA transcripts found … Continue reading
Protected: new hb analysis data
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Posted in Microscopy, Shadow Enhancers
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to image
Slides to image still: 04/06/10: C33, C55, untouched 22C and 30C 0-4 hr slides. Need cc13 embryos 01/07/10: 3x snail in vnd[D38] 01/07/10: E(spl) x vnd[D38], E(spl); E(spl)/HbZ
Posted in Microscopy
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Protected: enhancer gradient analysis (hb + sna)
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Posted in Microscopy, Shadow Enhancers, Transcription Modeling
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