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Monthly Archives: December 2010
Protected: dominant repression
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Notebook Editing
Added Authors specific folder from pubmed to google reader.
Posted in Web development
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Protected: gap shadow paper figures
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Paper writing
Send updated version of Markov Paper in column format to Jacques. Revise code for schematic for the gains of independent enhancer function. (i.e. there are 20 cells missing from the 2-enhancer construct. With only 1 enhancer you might have expected … Continue reading
Fly Work
Move non-expanding stocks to 18C for break. Move 25C stocks to 22C for break. Flip MP11; HbZ and MP3; HbZ backup vials. Flip ac, and ac,sc bottles. Freeze fly collection cages.
Posted in Fly Work
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BioE 190D
Formatting student papers into PoSB magazine. Reformatted 10 articles in 3 hours — This takes longer than hoped.
Posted in Teaching
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Protected: gap shadow paper
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Ideas for further investigation
Fundamentals of Transcription How Number of TF binding sites affects transcription increase binding rate increase probability > n TFs are bound increase probability an enhancer promoter interaction activates the gene. Affinity: relation from multiple weak sites to strong sites predicting … Continue reading
Posted in Transcription Modeling
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Protected: Meeting with Levine
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Protected: shadow enhancer modeling
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Posted in Shadow Enhancers, Transcription Modeling
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