10:00 am – 8:00 pm
Exploring new metric:
- inspired by the dilate balls around each localization
- fast / robust approach: 3D distance threshold to other points (threshold pdist matrix)
- compute fraction of points from each channel colocalized with other channel (within threshold)
- multiply this fraction by length in kb of the domain to give estimate of ‘kb entangled’
Working on chromatin figures
- see git status
Discussing models
- see protected notes.