9:00 am – 11:30 pm
Chromatin Analysis
- re-analyzed C02 data (originally taken on STORM1, not the best data, background separation a bit difficult).
- looking an Kc CNV
- this genome is a bit of a mess (not sure how much noise is in this data either), but spot checking regions none seem especially or broadly out of average. Bxd is apparently over-replicated.
- tried to compare to clone8, but the modEncode link is broken
Exploring metrics
File names explain metrics (click to see). See also y-axis label
To do
- CoV of pdist matrix
- this looks promising: