9:30 am – 11:55 pm
New Data analysis tools
- generalized Hi-C plotter with Bogdan
- now does triangles too
- uploaded new HiC data. Looks much smoother, replicates with different enzymes look very similar.
Chromatin paper
- working on manuscript revisions
- discussed plans and progress with LM and team (6pm-8:30pm)
To do still
- comment on cell cycle and pairing in intro section (may need additional supplemental discussion)
- add p-values to all comparisons in Fig 2, 3, and Extended Data Fig 8 (and 6 and 7), with N cells per comparison.
- XZ recommends combining samples of same type for the fig 2/3/6/7 comparisons.
- check entanglement scores (rerun?)
- fix connectors
- combined fasta file