Thur 07/30/15

11:00 am – 7:30 pm, 9:30 pm – 10:45 pm

(9:00 am – 11:00 am volleyball practice)

Chromatin

Cell

  • plated Kc167 cells (in SFX) on glass
  • my more recent flask with the short Trypsin treatment is doing well.
  • the original passage with the longer Trypsin exposure is not looking so good.
  • tried removing Psc- cells by blowing (without Trypsin). works a little bit, not at all like with Trypsin.
    • added a little scraping an moved cells to new vial
  • tried imaging cells live labeled with Hoechst – doesn’t bleach much or blink
  • tried imaging cells live labeled with Draq5 – doesn’t bleach at all (or switch to dark state to blink)
    • tried both culture media and STORM BME imaging buffer.
  • Invitrogen has a number of other cell-permiable dyes: https://www.lifetechnologies.com/us/en/home/references/molecular-probes-the-handbook/probes-for-organelles/nuclear-and-chromosome-counterstaining-and-nissl-stains.html#head1

Cell cycle markers

  • CycA (DSHB)
  • phospho-H3 (M-phase specific) see here (fig 1, red)

Culturing Psc- cells

  • tried passage by scrapping — disaester, cells die
  • tried trypsin first spin looks good. No cells came down in PBS spin (sparse cells). Don’t look good on plates. I think I killed these.
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