probe making: chromatin condensation

Linearized templates for: inv A, E(Pc) A, tou A, en A (in order).

Gel extracted and purified.
All concentrations ~20 ng/uL.

 

 

 

 

 

 

Synthesis setup: [everything with T7 :), all templates same conc. ].
20x master:

  • 100 uL H2O
  • 80 uL Tx buffer
  • 20 uL DTT
  • 40 uL RNAse inhib
  • 40 uL T7 pol
  • Split 4 ways in 70 uL aliquots.  Add 10 uL appropriate hapten (dig, bio, dnp, flu)
  • Make 4 15 uL aliquots of each.  Add 5 uL of template to each sample.

Order: 1. inv A, 2. E(Pc) A, 3.  tou A, 4. en A.  rxns labeled by number only.  Started at 6:50P.

Confirm synthesis and carb treatment fragmentation.
Loading order:  flu 1-4, dnp 1-4, dig 1-4, bio 1-4

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