- minor tweak to TiffViewer
m MatlabPhotoshop/TiffViewer.m
minor tweak to TiffViewer
- split out assign dots to nuclei code from unsupervised dot finding script, so it can be called by other scripts.
+ AssignDots.m
split out assign dots to nuclei code from unsupervised dot finding script, so it can be called by other scripts.
- Updated imviewer to automatically ID and process all lsm files in target folder into tifs. Currently does not loop through multiple positions automatically.
m imviewer_lsm.m m jacquestiffread.m
Updated imviewer to automatically ID and process all lsm files in target folder into tifs. Currently does not loop through multiple positions automatically.
- New GUI TiffViewer, load image, change colors / contrast, toggle channels, save zooms.
+ MatlabPhotoshop/TiffViewer.m + MatlabPhotoshop/uiopen.m + colorshuffle.m m cyto2nucmap.m m imnucseg_pars0.mat m imnucseg_pars1.mat
New GUI TiffViewer, load image, change colors / contrast, toggle channels, save zooms. implements drag-and-drop file loading.
- running new data
m Unsupervised_DotFinding.m m Unsupervised_DotFinding2.m m Unsupervised_DotFinding4.m m Unsupervised_DotFinding5.m m Unsupervised_DotFinding7.m m im_nucseg.m
running new data
- minor updates to lsm processing files
m imviewer_lsm.m m mycontrast.m m read_planeT.m
minor updates to lsm processing files
- new functions for zeiss lsm files
+ lsm_tif_2_mytif.m + parselsm.m
new functions for zeiss lsm files
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