RNA in situ hybe buffers

Hybe Solution

  • 50% Formamide (Amresco, ultrapure)
  • 5x SSC
  • 100 ug/mL salmon sperm DNA
  • 50 ug/mL heparin
  • 0.1% Tween-20

 

Reagent For 250 mL stock
Formamide 125 mL
20x SSC 62.5 mL
Heparin 10 mg/mL lab aliquot 1.25 mL
10% Tween-20 2.50 mL
ssDNA 10 mg/mL lab aliquot 2.50 mL
ddH2O 56.25 mL

SSC = Na3CitrateX2H2O

 

PBT

 

Reagent For 1 L stock
PBS 10x 100 mL
10% Tween-20 10 mL
ddH2O 890 mL

 

 

Staining Buffer

 

Reagent For 50 mL For 1 mL
NaCl 5M 1 mL 20 uL
MgCl 1M 2.5 mL 50 uL
Tris pH 9.5 1M 5 mL 100 uL
10% Tween-20 0.5 mL 10 uL
ddH2O 41 mL 820 uL

 

Staining Solution

To 1 mL of staining buffer, add 9 or 13.5 uL NBT and 17.5 or 7 uL BCIP

  • If lab stock (75 mg/mL) add 9 uL NBT
  • If store bought (50 mg/mL) add 13.5 uL NBT
  • If lab stock (20 mg/mL) add 17.5 uL BCIP
  • If store bought (50 mg/mL) add 7 uL BCIP
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