Saturday 06/07/13

11:00 – 5:30P

Project 2

OligoPaint library code

  • Stupid transcriptome libraries necessarily have multiple copies of each gene for all the splice form variants. OligoArray returns these all as hits, even when their genome coordinates overlap.
  • finished BLAST function code

STORM1

Calibrating parameters for Steve

  • find calibration slide
  • remove cylindrical lens
  • check stage movement (small arrows should be 5 um steps)
  • adjust pixel size to compensate

Data Analysis

  • Run Steve2mat on mosaics for the last three weeks of data
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