Thursday 07/04/13

10:30 A – 4:00 P

project 2

  • planning meeting, layout update plan for Tuesday

STORM analysis

  • running Pc and Psc data on Cajal
  • copying remaining Psc data to ProRAID

Troubleshooting

  • Chr2p75,364,833-75,411,965teloE2p1toE2p2_oligo won’t run in OligoArray
  • runs at size 100 (not very good for finding 42mers). Not running at size 500 or up.
  • 400 runs.

Goals / To do:

BJ review

  • repeat computations of Sanchez2008

Ph project

  • Cluster size analysis of Ph
  • Degree of clustering and cluster size analysis of Pc
  • Topology analysis for chromatin spots
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