9:30a – 10:00p
STORM
- Stop O/N STORM of E12: 630 kb G
- transfer data to ProBox 4
- Running out of disk space again. Order 2x 4Tb HDs
- Set up O/N STORM G9 (75kb B)
Rowland Inst (10a – 2:30p)
- Seminar
- meetings with fellows
Ph simulations
- with Ph-flag levels > Ph, can we explain the size distribution?
- cluster size distribution has a strong tendancy to form discrete peaks (probably due to the discrete geometry of the situation.
- what if ultimate cluster size at a particular chromatin locus is limited by availability of H3K27me3 histones?
STORM analysis
- Analyzing F06 dots. very interesting. Need to do RNA and DNA separate stains for Y regions.
STORM data processing
- SplitDax does this weird thing where it skips most of the movies (just prints size 0). Rerunning it (especially rerunning from a new QVDax folder with jsut the storm, it actually runs correctly.
- This movie splitting is actually a real pain. Should definetely try to get Hal to write out separate movies.