September 2025 M T W T F S S « Aug 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 Categories
- AP patterning (13)
- Blog (1)
- Chromatin (88)
- Conference Notes (72)
- Fly Work (54)
- General STORM (25)
- Genomics (134)
- Journal Club (22)
- Lab Meeting (66)
- Microscopy (79)
- Notes (1)
- probe and plasmid building (58)
- Project Meeting (3)
- Protocols (13)
- Research Planning (74)
- Seminars (21)
- Shadow Enhancers (59)
- snail patterning (40)
- Software Development (5)
- Summaries (1,412)
- Teaching (9)
- Transcription Modeling (40)
- Uncategorized (10)
- Web development (19)
Links
Tags
analysis cell culture cell labeling chromatin cloning coding communication confocal data analysis embryo collection embryo labeling figures fly work genomics hb image analysis image processing images in situs Library2 literature making antibodies matlab-storm meetings modeling MP12 mRNA counting Ph planning presentation probe making project 2 project2 result results sectioning section staining shadow enhancers sna snail staining STORM STORM analysis troubleshooting writing-
GitHub Projects
Author Archives: admin
Wednesday 04/23/14
8:30a – 10:45p Career planning from Jeff: K99 next application deadline is June 12th. After that it’s October 12th (see NLM page, NIGMS not as clearly laid out). recommended to apply with time to submit resubmission ~8 months after original … Continue reading
Protected: project 2 update: 04/23/14
There is no excerpt because this is a protected post.
Tuesday 04/22/14
9:30a – 8:30p issues with z-calibration fixed bug missing sqrt() in wx = w./sqrt(ax) and wx = w./sqrt(ax) take zcal bead images. Run Z-calibration script on these to generate curve fits use the curve fits to refit the beads, plot … Continue reading
Posted in Summaries
Comments Off on Tuesday 04/22/14
Monday 04/21/14
9:00a – 6:00p, 10:00p – 12:00a Lab meeting see notes post-doc candidate interview individual post-doc candidate meetings STORM attempted to re-image G08-P3-750 G06-P1-647 sample. All 750 spots have vanished! buffer issue? poor secondary stickiness issue? Imaged L3 E08 samples using … Continue reading
Posted in Summaries
Comments Off on Monday 04/21/14
Protected: post-doc interview
There is no excerpt because this is a protected post.
Posted in Lab Meeting
Comments Off on Protected: post-doc interview
Protected: project 2: to do
There is no excerpt because this is a protected post.
Posted in Summaries
Comments Off on Protected: project 2: to do
Thursday 04/17/14
STORM prism2 lost focus just after midnight (~minutes after I checked it and went home) prism2 now upgraded to STORM1. Jeff looking into peizo replacement. (How about a piezo swap with STORM4 dual-objective?) continue imaging on STORM2 sample E07 Staining … Continue reading
Posted in Summaries
Comments Off on Thursday 04/17/14
Wednesday 04/16/14
9:00a – 11:45p Goals project 2 team meeting project 2 design new experiments start analysis Project 2 see post General notes wordpress site / notebook running very slow today. STORM imaged beads imaging E07 on prism2 New hybes ~4/11 cells … Continue reading
Posted in Summaries
Comments Off on Wednesday 04/16/14
Protected: project 2, 04/16/14
There is no excerpt because this is a protected post.
Tuesday 04/15/14
9:30a – 11:55p Computer stuff troubleshooting Cajal 590 GTX graphics card fried installed AMD card that came with Dell not recognizing all RAM (only 40 of 48 GB recognized) Turned off, pressed all RAM firmly into DIMM slots. Now only … Continue reading