Category Archives: Web development

Biophysics page web-development

Progress on removing comments: Turning comments off removes comments only on unmade pages. Deleting on page-loop.php the reply section effectively removes from supporting pages (maybe not the home page / posts reply).  Try the post-loop.php? Image upload not fixed by … Continue reading

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shared multi-user git repo

Notes on making a github public repository into a shared project modifiable on multiple computers by multiple users.  (Applied today for my GitHub project AlistairBoettiger/Image_Analysis, added user AlistairMobile. First new users need github account.  Then need git installed on the … Continue reading

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Code maintenance

Purge binary data files from git repository to shrink repository size. $ bash git-delete-history.sh  binarydata.mat Uses script from David Underhill git-delete-history.sh Push updates to online repository to overwrite history (using force): $ git push origin master –force Ran on all … Continue reading

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Common git commands

Making notes of common git commands: From within the file directory (PATH$),  remove files which have been deleted: $(git ls-files –deleted) delete all removed files, update whatever was modified, add new files $git add -u [Neither of these remove from … Continue reading

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Reflections

If I have a coding problem (such as the python scripts I was coding today) I can with the click of a button ask a question of the whole world–and within minutes to days, get replies from experts everywhere.  A … Continue reading

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Image database ideas

Something to consider: Picasa hosting for all data ($5/yr 20GB).  snail boundary data is 1.5 GB, Shadow data is 6.5GB.  All Raw data is 310 GB. Adventages: make available to public upon publication share with co-authors access data anywhere permanent stable … Continue reading

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Migrating Research Website

Recreating research / personal website as a wordpress site on alistairboettiger.info.

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Notebook Editing

Added Authors specific folder from pubmed to google reader.

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Notebook updates

added MathJax plugin for imbedded latex.  Doesn’t seem to work. Switched to wp-latex.  This works: $latex e^{\i \pi} + 1 = 0$ Also install WP-table Reloaded for table editing Migrate Fly database to online hosting

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