Monthly Archives: September 2014

Tuesday 09/23/14

Posted on September 23, 2014 by admin

10:00am – 12:45 am project 2 working on data analysis. see posts from today and tomorrow.

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Monday 09/22/14

Posted on September 22, 2014 by admin

8:45 am – 4:30 pm, 10:30 pm – 11:30 pm Chromatin project planning discuss multicolor and sequential coding schemes to incorporate with STORM tracing copied some data sets of polymer simulations in various compacted states for Bogdan to test algorithm … Continue reading →

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Saturday 09/20/14

Posted on September 20, 2014 by admin

12:00 pm – 11:30 pm multi-color epigenetic/structural boundaries finalizing implementation / tests of the Bogdan’s Christofides TS algorithm for matlab fixed some memory allocation issues, installed MinGW windows compiler in software to compile c code. Runs nicely. (Matlab may require … Continue reading →

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Friday 09/19/14

Posted on September 19, 2014 by admin

10:00 am – 8:00 pm Exploring new metric: inspired by the dilate balls around each localization fast / robust approach: 3D distance threshold to other points (threshold pdist matrix) compute fraction of points from each channel colocalized with other channel … Continue reading →

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Wednesday 09/17/14

Posted on September 17, 2014 by admin

9:30 am – 10:30 pm 9:30-11:00 select some multicolor regions for a training set, send to BB commenting on over interpretation of data in paper highlighted in the Crimson. project 2 see notes draft google presentation summary of results, share … Continue reading →

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Protected: project 2: analysis 09/17/14

Posted on September 17, 2014 by admin

There is no excerpt because this is a protected post.

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Tuesday 09/16/14

Posted on September 16, 2014 by admin

9:30 am – 1:00 am AO demo 9:30am – 12:00pm demo instruction with Rep AO needs firewire connection to computer 2, can’t talk to the STORM3 computer take calibration first with beads 5:00pm – 6:00pm trying out sample figure making … Continue reading →

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Monday 09/15/14

Posted on September 16, 2014 by admin

9:30 am — 4:50 pm, 9:30 pm – 1:15 am Meetings lab meeting 10-12:15 pm, see notes journal club 12:15 – 1:00 pm see notes project 2 team meeting, 3:00 pm ? – ? project 2 to do see notes. … Continue reading →

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journal club 09/15/14

Posted on September 15, 2014 by admin

Guisheng: Nature, Auditory corollary discharge background different cortical regions interact strongly (e.g. motor cortex talks to other cortexes) this is called “corollary discharge”. Observations auditory cortical excitatory connections are suppressed during movement. apparent anticiaption of movement? — supression starts before … Continue reading →

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Protected: lab meeting 09/15/14

Posted on September 15, 2014 by admin

There is no excerpt because this is a protected post.

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