9:00 am – 7:30 pm
Finalizing draft of chromatin manuscript
- revised gene expression panels in figure 1
- added additional references to text
- wrote figure captions
Additional references for chromatin literature
P Geyer
- chromatin organization and function (spatial positioning effects) 2011 http://www.sciencedirect.com/science/article/pii/S0955067411000196
- chromatin organization and function (editorial, histone code and 3D genome organization) 2008 http://ac.els-cdn.com/S0027510708002522/1-s2.0-S0027510708002522-main.pdf?_tid=abb4d7a8-d194-11e4-906b-00000aacb361&acdnat=1427139899_12a077eb9fafec4dbe28b479c17def4b
- Insulators review (2003): http://www.sciencedirect.com/science/article/pii/S0955067403000395#
G Bosco
- Condensins and chromatin organization: http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3927828/pdf/nihms528141.pdf
G Karpen
- Nucleus (editorial intro) http://www.sciencedirect.com/science/article/pii/S0955067414000581#. Discusses 3D genome organization hypothesis
Other relevant chromatin literature
- continue reading up recent Hi-C publications:
- van Bortle 2014 Genome Biology on Insulator function
- Seitan 2013 on Cohesin
- Schoenfelder 2015 on Promoter-enhancer interactions by promoter capture Hi-C