Meeting XZ

Requests / timeline from XZ

• complete broad survey of regions before diving too deep on models
• hopefully one or two parameters can explain scaling between different regions
  • naturally unsatisfying if a different / unrelated model is invoked for each scaling curve.
  • e.g. density of binders.
  • nucleosome free regions as non-self-associating stretches?
• estimate time to complete curve for each chromatin type.

Things for next time

Clarifying what might have been misunderstood about last meeting

• remind XZ goal of this (last) meeting was to present Bogdan’s work
• hence we did not prepare slides on yellow, red, or green chromatin
• also hence the focus on the balance of experiments and modeling, which I think combine to produce a more complete rotation project, even if they might be a bit out-of-sequence for our research timeline.