Author Archives: admin

Protected: project 2 update 6/18/14

Posted on June 18, 2014 by admin

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Wednesday 06/18/14

Posted on June 18, 2014 by admin

9:30 am – 7:30 pm, 10:00 pm – 12:30 am Tasks Revise figure for XZ New Library Design Final checks for lib5 send Fasta file to Marcelo and request for quote to Alec and Matt Sequential staining Lib2 F05 + … Continue reading →

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Tuesday 06/17/14

Posted on June 17, 2014 by admin

10:00 am – 5:00 pm, 7:00 pm – 11:40 pm Literature interesting article on FACs smFISH sequencing from vanO group. interesting article on noise models for single cell sequencing from vanO group as well STORM D01 finished smoothly setting up … Continue reading →

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Monday 06/16/14

Posted on June 16, 2014 by admin

10:00 am – 5:45 pm, 8:30 pm – 12:05 am Lab meeting see notes on RC discussion see notes on conference update Other meetings project 2 team meeting, 4pm chromatin project data update, 5pm # send new plots to XZ … Continue reading →

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Protected: Conference Update: Bryan

Posted on June 16, 2014 by admin

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Protected: Sunday 06/15/14

Posted on June 16, 2014 by admin

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Protected: Research Computing

Posted on June 16, 2014 by admin

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Saturday 06/14/14

Posted on June 14, 2014 by admin

4:00 pm – 11:00 pm Lib5 assembly continues found bug in probe sizes, new 40mers had been overwriting some of the 30mer sublibraries. Data Analysis re-analyze B02 (+ more cells) finish analysis of B06 analyze more cells from B05 analyzing … Continue reading →

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Friday 06/13/14

Posted on June 13, 2014 by admin

4:00 pm – 7:00 pm (return from Maine). Goals Finish construction of Lib5 (with chromatin lib 4). Library Design Running CompileOligoArray Script on Library5 40mers. didn’t screen out repeat probes and rRNA blast out of ProbeData structure in previous runs. … Continue reading →

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Tuesday 06/10/14

Posted on June 10, 2014 by admin

9:30a Lib5 prep need to split up black regions spent several hours needlessly parsing lib3 to encoproate into lib5. building stringent BLAST against highly expressed sequences and ribosome sequences. Discussions discussing with Junjie methods for statistical testing of data, methods … Continue reading →

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