Monthly Archives: June 2011

Sunday 06/05/2011

Posted on June 5, 2011 by admin

9:40 A — 4:00P, 8:00P -10:30P Finish ON confocal MP09Hz, 10 embryos imaged, 2 too deep z-plane. Writing abstract for Banff (due tomorrow) Successfully formated 6TB drive for single partition readable by Mac and Linux systems: had to partition down … Continue reading →

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Draft abstract for Banff

Posted on June 5, 2011 by admin

Title: Unique features of metazoan gene regulation provide robust cell fate decisions from stochastic components. Alistair N Boettiger, Jacques Bothma, Michael Perry, Michael Levine Abstract: The developmental patterning of multicellular organisms requires precise control on the scale of microns and … Continue reading →

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Saturday 06/04/2011

Posted on June 4, 2011 by admin

10:10 A – 7:00P, 8:00P – 10:30P Confocal 2-label control image (with improved laser power & gain).  –> Still a bit low but much improved. Working on DotFinding.  Found bug in intensity report for CheckDotUpDown.m when working on subsampled images. … Continue reading →

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Friday 06/03/2011

Posted on June 3, 2011 by admin

11:00A – 6:00P Take mCD8-GFP colonies out of 37C gel extract mCD8-GFP Fix embryos (2-5 hrs), all 7 cages Get Jacques onboard git Image_Analysis project. Branch OpenImageProcessing (local name) / Image_Analysis (git project name) to new branch, Alistair, for development.

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Thursday 06/02/11

Posted on June 2, 2011 by admin

10:00 A – 5:15 P Meeting with Ken and Jan to discuss biophysics website.  Agreed for setup of wordpress on QB3 server. Finish ON confocal MP10 New confocal image of s14 control (competition labeling) working on imviewer — add channel … Continue reading →

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Wednesday 06/01/11

Posted on June 1, 2011 by admin

9:40 A — 7:10P, 8:00P – 12:15 A Finish ON confocal run of 6x bcd 10A Flip collection cages Working on imviewer_lsm rewrite Interview with David Stern found missing fclose statement in imviewer that fills up memory.  imwrite crashes matlab … Continue reading →

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