Monthly Archives: July 2011

Friday 07/15/11

8:20 A – 4:30 P prep for website meeting website meeting 9A-11A Reading reviewing Stathopoulos updates. y snail figures for MS

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Thursday 07/14/11

8:10 A – 4:45P Start flipping fly stocks (1-50 flipped) Mean wt sna levels /slide vary between 150 and 250. Project MP10_b data.  1 duplicate and 1 part bleached image.  8 good embryos. brk on Y and brk deletion lines … Continue reading

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Wednesday 07/13/11

8:35 A — 3:50P, 8:00P – 11:00P Running E(spl)_m8 data and repeat YW Figures for E(spl) and vnd data Printing probe labels (for Levine Lab database) Printing probe template labels (for Levine Lab database) Aliquoting probes. Figures for APtoll APtwi-rm910 … Continue reading

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Protected: hb cc13 mRNA count summaries

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Protected: MP06b (cc13 no shadow)

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Tuesday 07/12/11

8:15 A — tried high threshold on high consecutive layers for MP06 counts, need to repeat with standard trial set of inputs. Rewriting hb-curve plotting to compute means of multiple gradients (using interp1 so curves can be matched on x-axis). … Continue reading

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Monday 07/11/11

8:00 A –9:30P Prep for lab meeting lab meeting presentation on hb mRNA counting data (with some sna data update) MP06b data analysis: imviewer, im_nucseg, and launch dot counting

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Protected: Lab meeting feedback

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Saturday 07/09/11

3:50 – 5:20P, 7:00 P Revise warning signals MS for Carl. sent back. Confocal sna BAC rescues

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hb y Hz data summaries

Set missG to 1 for all data sets. Using raw density instead of size-adjusted counts per cell subtracting maternal contribution post processing as removing lowest cell count. Without maternal correction: 

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