Monthly Archives: September 2012

Sunday 09/30/12

Posted on September 30, 2012 by admin

5:15P-6:45P, 8:00P-10:00P returned from lab retreat (Friday 4:30P – Sunday 2:00P). working on CR revised supplement Revised Supp Mat (with new section), Revised Supp figures, and 2 draft ‘graphical abstracts’ sent to ML for review.

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Protected: poster abstract: Damon Runyon Fellows Retreat

Posted on September 28, 2012 by admin

There is no excerpt because this is a protected post.

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Thursday 09/27/12

Posted on September 27, 2012 by admin

9:35 A  – 10:10 P Revising text Revising figures: convert all fonts, etc Finished first complete run-through of response to reviewers,  Additional to do.  (X indicates complete) X reformat all references (opening on laptop lost references?) X check that legends … Continue reading →

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Friday 09/27/12

Posted on September 27, 2012 by admin

9:15 A -4:30 P Microscope Confocal with Yari (lab spinning disk 488 is down) # 750 laser arrived, talk to Graham about STORM 2 rebuild Fly Work Flip E(spl) and sim fly stocks Flip all bottle stocks No flies arrived … Continue reading →

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Transcription traffic jams

Posted on September 26, 2012 by admin

Selth et al Elongation Review: polII collisions yield backtracking, pol II collisions yield reactivation / push through of paused leaders.  Longer genes have more traffic jams (Swinburne 2008 G&D, see below). Saeki and Svejstrup 2009 Mol Cell Collisions can push … Continue reading →

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Protected: Gordon conference App

Posted on September 26, 2012 by admin

There is no excerpt because this is a protected post.

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Wednesday 08/26/12

Posted on September 26, 2012 by admin

9:45 A – 7:30P, 9:30P – 12:15 A Coding (To do) Convert all function calls in STORMrenderer that are not button press objects to separate, free-living functions.  (Maybe make subfolder ‘routines’ and save in there?) This way these functions can … Continue reading →

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Protected: Tuesday 09/12/12

Posted on September 25, 2012 by admin

There is no excerpt because this is a protected post.

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Friday 09/21/12

Posted on September 21, 2012 by admin

(Working remotely from Berkeley) Ideas: can I have the analysis script call Git bash and update the code with a ‘run to export images’ (check with Carl?) export a text file at the same time as it writes an image: … Continue reading →

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Thursday 09/20/12

Posted on September 20, 2012 by admin

(Working remotely from Berkeley) Fixed issues with passing variables in current GUI for STORM rendering.  Just declare all shared parameters as global instead of passing them around as fields in the GUI handles structure.  This saves a lot of commands … Continue reading →

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