Monthly Archives: March 2014

Protected: Oligo-Secondaries figure

Posted on March 19, 2014 by admin

There is no excerpt because this is a protected post.

Posted in Chromatin | Tagged | Comments Off on Protected: Oligo-Secondaries figure

Tuesday 03/18/14

Posted on March 18, 2014 by admin

9:30a – 6:30p, 11:00p – 1:00a Oligo Secondaries work out new strategy for figure need simulations of binding density Chromatin Polymer simulations Goal: illustrate effect of localization counts * wrote new basic StickyPolymer simulation function * wrote some new polymer … Continue reading →

Posted in Summaries | Tagged , | Comments Off on Tuesday 03/18/14

Protected: project 2 03/19/14

Posted on March 18, 2014 by admin

There is no excerpt because this is a protected post.

Posted in Genomics | Tagged , | Comments Off on Protected: project 2 03/19/14

Monday 03/17/14

Posted on March 17, 2014 by admin

9:45a – 8:00p Computer Maintenance security updates on Cajal + reboot security updates on Tuck – reboot postponed due to users still analyzing data write to CDW about is this software or just a number: 2012 server why 2 versions … Continue reading →

Posted in Summaries | Tagged , | Comments Off on Monday 03/17/14

Protected: Overview of 140310 L4E4 data

Posted on March 17, 2014 by admin

There is no excerpt because this is a protected post.

Posted in Genomics | Tagged , , | Comments Off on Protected: Overview of 140310 L4E4 data

Sunday 03/16/14

Posted on March 16, 2014 by admin

10:30a – 6:00p Goals flip fly stocks (done) passage cells (done) scheduling christia (May 17-20) dad’s conference (April 25th) dentist (May 7th) More data processing! running splitdax on 140310_L4E4 data running bead averaging on 140310_L4E4 data analyzing averaged beads from … Continue reading →

Posted in Summaries | Tagged , , | Comments Off on Sunday 03/16/14

Rethinking Project Organization

Posted on March 16, 2014 by admin

How do you organize your research projects? For the last three years or so, I have adopted a project organization structure along the lines recommended by William Noble in PLoS CB: A Quick Guide to Organizing Computational Biology Projects. The … Continue reading →

Posted in Research Planning | Comments Off on Rethinking Project Organization

Protected: Overview of 140308 L4E3 data

Posted on March 16, 2014 by admin

There is no excerpt because this is a protected post.

Posted in Genomics | Tagged , , | Comments Off on Protected: Overview of 140308 L4E3 data

Friday 03/14/14

Posted on March 14, 2014 by admin

9:45a – 9:00p Meetings meetings with G0 students, present lab research, discuss lab life Computing resources Troubleshooting Tuck high flucutating memory despite little use memory drops precipitously when Hao closes matlab TSTORMdata drive is still flashes in use, despite no … Continue reading →

Posted in Summaries | Comments Off on Friday 03/14/14

Thursday 03/13/14

Posted on March 13, 2014 by admin

9:00a — 11:30p communication Help Jaeger student with Unsupervised_Dotfinding.m (see email) meetings planning meeting for G0 presentation jeff will embed movies got slide from Bryan got movies from Colenso put in example images of chromatin need to rehearse talk! meeting … Continue reading →

Posted in Summaries | Tagged , , | Comments Off on Thursday 03/13/14