Monthly Archives: September 2014

Sunday 09/14/14

Posted on September 14, 2014 by admin

10:00 am – 11:59 pm STORM New Dave screwed up the sequence of events – moves before changing parameters This has destroyed all my conventional images during STORM, and seriously bleached my dyes. — 750 region gets blasted with max … Continue reading →

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Protected: project 2 update: 09/14/14

Posted on September 14, 2014 by admin

There is no excerpt because this is a protected post.

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Saturday 09/13/14

Posted on September 13, 2014 by admin

10:00 am – 9:00 pm STORM STORM4 imaging issues with STORM4 focus lock discuss with Jeff STORM2 imaging pure MEA buffer looks better for 750 than mixed MEA/BME buffer imaging E08-6 E07-6. Looks good. background a bit high. Chromatin paper … Continue reading →

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Friday 09/12/14

Posted on September 12, 2014 by admin

10:00 am – 11:00 pm Chromatin working on 3D image rendering in designated chromatin colors consulting with Bogdan on color schemes exploring transparency mixing vs. color wheel mixing to highlight overlap. draft of color domains — blue::blue scheme still needs … Continue reading →

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Thursday 09/11/14

Posted on September 11, 2014 by admin

10:00 am – 6:50 pm Meetings 11:00am – 1:45pm, meeting with Xiaowei, Leonid, Jeff and Bogdan shared slides and Hi-C paper remote computing troubleshooting Odyssey. troubleshooting OligoArray errors. project 2 see notes.

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Protected: project 2 update: 09/10/14

Posted on September 10, 2014 by admin

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Wednesday 09/10/14

Posted on September 10, 2014 by admin

9:30 am – 10:30 pm Too many little tasks order new RAID hard drive enclosure and disks analyze new data for project 2 adding plotting functions to new pipeline for project 2 — aborted break down STORM2 run record new … Continue reading →

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Sunday 09/09/14

Posted on September 7, 2014 by admin

11:00 am – 5:00 pm, 10:00 pm – 11:55 pm tasks break down STORM run # transfer data # fit molecule localizations finish compiling oligo-array output folders. finish writing review first complete draft finished. just need to read through this … Continue reading →

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Saturday 09/06/14

Posted on September 6, 2014 by admin

9:00 am – 10:00 pm Goals: Multi-color STORM of a second black::black interface 3D multi-color rendering for meeting STORM set up imaging of L3D10-6 D11-7. raw data look good computer still laggy but usable laser could use some centering field … Continue reading →

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Friday 09/05/14

Posted on September 5, 2014 by admin

10:00 am – 12:00 am Update on running Analysis Cajal and Tuck still building library, 20-40% complete. Won’t be done for another 24 hours at the earliest. maybe longer as the day brings competition of these cores and my programs … Continue reading →

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