Categories
- AP patterning (13)
- Blog (1)
- Chromatin (88)
- Conference Notes (72)
- Fly Work (54)
- General STORM (25)
- Genomics (134)
- Journal Club (22)
- Lab Meeting (66)
- Microscopy (79)
- Notes (1)
- probe and plasmid building (58)
- Project Meeting (3)
- Protocols (13)
- Research Planning (74)
- Seminars (21)
- Shadow Enhancers (59)
- snail patterning (40)
- Software Development (5)
- Summaries (1,412)
- Teaching (9)
- Transcription Modeling (40)
- Uncategorized (10)
- Web development (19)
Links
Tags
analysis cell culture cell labeling chromatin cloning coding communication confocal data analysis embryo collection embryo labeling figures fly work genomics hb image analysis image processing images in situs Library2 literature making antibodies matlab-storm meetings modeling MP12 mRNA counting Ph planning presentation probe making project 2 project2 result results sectioning section staining shadow enhancers sna snail staining STORM STORM analysis troubleshooting writing-
GitHub Projects
Monthly Archives: February 2011
Protected: MP08 rescue (no shadow)
There is no excerpt because this is a protected post.
Posted in Shadow Enhancers
Enter your password to view comments.
Thursday 02/17/11
9:10 A — 7:05P, 7:50P – 11:00P Finishing draft presentation for practice talk. wash, stain nuclei, and mount slides (in situs). collect virgins Flip collection plates 5:20P (fog and fog; Hkb-fog). Reorganizing presentation flip fly stocks Confocal, MP08 rescues Confocal … Continue reading
Posted in Summaries
Leave a comment
on statistical testing
Reviewer asserts “the appropriate test for these particular data is a two-way ANOVA, (but be careful when analyzing proportions. The data should be arc-sine transformed to minimize deviations from the assumption of normality). ANOVA has long been used to classify … Continue reading
Posted in Shadow Enhancers
Leave a comment
Wednesday 02/16/11
11:00 A — 4:oo P, 9:20P – 10:00P in situs day 3. Post-doc interview (from Long Lab) collect virgin DB BAC-4s and DB hb[D]s Recover A. Mori data for Ciona team Biophysics Dinner collect virgin DB BAC-4s and DB hb[D]s … Continue reading
Posted in Summaries
Leave a comment
Tuesday 02/15/11
10:30A — 7:00 P, 10:30P-12:30A in situs day 2. Using heat block for hot washes GP a-twi antibody for Bilder lab (re-suspend in 50% glycerol). Flip collection cages 12:30P. All fog lines hardly laying at all. clean up im_quant_sna_v3.fig for Jen … Continue reading
Posted in Summaries
Leave a comment
Monday 02/14/11
10:00A — 12:30 A 11A, Stop confocal run: (only finished 10 embryos) Collect virgin DB04 and DB Hb[D]s Biophysics training grant strategy meeting. in situs day 1B. book hotel at Sloan, (Bentley Hotel 500 E. 62nd St., 888-664-6835) conf-rv: 11828 … Continue reading
Posted in Summaries
Leave a comment
3D-dot segmentation.
Working on 3d dot visualization, check duplicate dot counting code and explain method. These images are endogenous snail from MP09 imaging. Gaussian sphere pretty good, most dots successfully caught in 3 layers using 340nm steps. Nice yellow center to … Continue reading
Posted in Microscopy
Leave a comment
Sunday 02/13/11
12:45 P – 7:00 P, 9:00P — 12:10 A Finish confocal run (MP10, slide from 2/2/11 in situs) Collect virgins from DB04 cross. Analyzing new MP10 data New fog- collection cage. fog flies ready to collect virgins and cross to … Continue reading
Posted in Fly Work, Summaries
Leave a comment
Saturday 02/12/11
10:30 A – 8:00P, 9:00P – 11:35 P Write to Ptashne about additive vs. cooperative (vs multiplicative). Finish first draft of reviewer comments and send to Peter and Steve. Writing new imviewer_lsm GUI. Now functional. Heating up lasers in first … Continue reading
Posted in Summaries
Leave a comment
Protected: Comparing tiling data to counting data
There is no excerpt because this is a protected post.
Posted in Microscopy, Transcription Modeling
Enter your password to view comments.