September 2025 M T W T F S S « Aug 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 Categories
- AP patterning (13)
- Blog (1)
- Chromatin (88)
- Conference Notes (72)
- Fly Work (54)
- General STORM (25)
- Genomics (134)
- Journal Club (22)
- Lab Meeting (66)
- Microscopy (79)
- Notes (1)
- probe and plasmid building (58)
- Project Meeting (3)
- Protocols (13)
- Research Planning (74)
- Seminars (21)
- Shadow Enhancers (59)
- snail patterning (40)
- Software Development (5)
- Summaries (1,412)
- Teaching (9)
- Transcription Modeling (40)
- Uncategorized (10)
- Web development (19)
Links
Tags
analysis cell culture cell labeling chromatin cloning coding communication confocal data analysis embryo collection embryo labeling figures fly work genomics hb image analysis image processing images in situs Library2 literature making antibodies matlab-storm meetings modeling MP12 mRNA counting Ph planning presentation probe making project 2 project2 result results sectioning section staining shadow enhancers sna snail staining STORM STORM analysis troubleshooting writing-
GitHub Projects
Tag Archives: chromatin
chromatin regulation
Selected ubiquitous genes flanking Antp complex: Taf1 (left) and alphaTub84B (right). Need to clone and make probes for these at some point. Look at maintenance of gene activation –how to keep a gene on. Does it require enhancer looping. How … Continue reading
Posted in Chromatin, Research Planning
Tagged Antp, chromatin, H3K27
Comments Off on chromatin regulation
Tuesday 11/22/11
10:00 A – 8:00P, 9:00P-10:00P Finishing annotation of revised CheckDotUpDown code to do 3D dotfinding. Running test analysis of MP06 data. New method for finding unique spheres is easier to read but much much slower, need to find some solution … Continue reading
Saturday 10/22/11
3:00P – 7:00P, 11:00P – 12:00A test gel for repeat trial of nicked translation — still no DNA detectable on gel, despite DNA detectable on spec. Trying straight gel of original isolated DNA — still no band test PCR of … Continue reading
Posted in probe and plasmid building, Summaries
Tagged chromatin, DNA-FISH
Comments Off on Saturday 10/22/11
Protected: Exploring loss of sna expression
There is no excerpt because this is a protected post.
Posted in Research Planning, Shadow Enhancers
Tagged chromatin, sna, trouble shooting
Enter your password to view comments.
Planning for chromatin condensation imaging
Planning chromatin staining inv expression pattern: maternal, broad, late seg-polarity gene. en expression pattern: early seg-polarity gene, front on first tou expression pattern. Maternal and ubiquitous. Yay. E(Pc) expression pattern. ‘faint ubiquitous’. Hope this works. 5′ probe from tou may be … Continue reading