September 2025 M T W T F S S « Aug 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 Categories
- AP patterning (13)
- Blog (1)
- Chromatin (88)
- Conference Notes (72)
- Fly Work (54)
- General STORM (25)
- Genomics (134)
- Journal Club (22)
- Lab Meeting (66)
- Microscopy (79)
- Notes (1)
- probe and plasmid building (58)
- Project Meeting (3)
- Protocols (13)
- Research Planning (74)
- Seminars (21)
- Shadow Enhancers (59)
- snail patterning (40)
- Software Development (5)
- Summaries (1,412)
- Teaching (9)
- Transcription Modeling (40)
- Uncategorized (10)
- Web development (19)
Links
Tags
analysis cell culture cell labeling chromatin cloning coding communication confocal data analysis embryo collection embryo labeling figures fly work genomics hb image analysis image processing images in situs Library2 literature making antibodies matlab-storm meetings modeling MP12 mRNA counting Ph planning presentation probe making project 2 project2 result results sectioning section staining shadow enhancers sna snail staining STORM STORM analysis troubleshooting writing-
GitHub Projects
Author Archives: admin
Protected: Ph project, cell variation issues
There is no excerpt because this is a protected post.
Wednesday 01/08/14
10:00a – 5:30p, 9:30p – 11:30p Ph project Ph project model figures for Ajaz. See post Reorganized figure producing code (see Code\Results) Chromatin analysis copying F05 data over to Probox 7 Running analysis of F03 and F04 while copying data … Continue reading
Protected: Ph project update
There is no excerpt because this is a protected post.
Tuesday 01/07/14
10:00a – 10:15p chromatin data collection Finish O/N STORM on F04. Transfer data from F03 and F04 to Monet start analysis of F03 and F04 data wash out stains for new BX-C regions: F05, G04 (ANTC), F03-F04-F05 combo, F05-A647 F06-A750. … Continue reading
Monday 01/06/13
10:00a – 11:30p Meetings lab meeting (post-doc interview). See notes post-doc chat fixing up slides for post-doc chats, moving onto google docs so that the presentation is mobile google docs having issues loading images in presentations that used to display … Continue reading
Protected: post-doc interview: 01/06/13
There is no excerpt because this is a protected post.
Posted in Lab Meeting
Comments Off on Protected: post-doc interview: 01/06/13
Sunday 01/05/2014
10:30a – 8:00p, 10:00p-11:50p literature continue reading Berlivet et al PLoS Genetics on HoxA ID 19 candidate enhancers by ChIP and 5C 8 of 10 tested LacZ transgenics show limb bud enhancer activity TAD contacts in silent tissue Shh signalling … Continue reading
Saturday 01/04/13
10:00a – 11:55p (sailing canceled do to malfunction of committee boats) coding matlab-storm RunDotFinder “skip existing” option on DaoSTORM I believe is interpreted as resume and in insightM as actually skip. This should be double checked and made clearer. Maybe … Continue reading
Friday 01/03/2014
remotely 10:30a – 11:30a (snowstorm) Winterize bike: 11:30a – 2:00p lab: 2:00p – 9:00p Goals switch road tires for mountains for better stability in the snow Design new primer collection for chromatin library 3. Pick more regions for multi-color experiments: … Continue reading
Thursday 01/02/2014
9:30a – 9:00p Ph project Finish O/N STORM run Take IR bead images (slide is also getting clumpy. Maybe we need to stick these down with EDAC. I think making slides for long term storage with Glox is also a … Continue reading