Monthly Archives: May 2011

yellow probe templates made

probe templates (sog, y1, y2).  y1 is distal tip of large exon (500 bp + 3UTR (oops, should have left out the UTR), y2 is proximal part, 800 bp.

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Saturday 06/07/11

11:00 A — 7:20P, 8:15P – 11:15P New collection cages: 6x bcd and 1x bcd Test gel for PCR linearizations Attempting movie of transcription in matlab.  Too slow wastes many hours. Gel extract y1 probes. Working on snail manuscript.  Send … Continue reading

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Friday 05/06/11

9:30A – 9:10 P Getting supplies for thesis seminars Working on thesis writing Thesis seminar (Liz Xu) 2:00-3:30 Flip Gal4-bcd’3-UTR flies into new bottles (5). Sort 6x bcd (non-CyO) (2 bottles worth). Finish first draft of snail patterning chapter for … Continue reading

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Thursday, 05/05/11

9:40 A – 5:15 P, 11:00 P – 12:00A Thesis submitted to Steve Evans (with Ch 5 still in process). submit thesis to Rokhsar rescued BAC hb[D] controls need help airate and water MP’s flies. working on snail chapter GTEM … Continue reading

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Wednesday 05/04/11

9:40 A –4:00P, 8:00P – 1:00A Thesis writing.

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Tuesday 05/03/11

9:00 A – 7:00P, 7:40P – 10:00P Finish confocal run (C55, 22C).  Save data imviewer filter on C55_30C data. Request from ML: Movie: Pol II sitting in groove getting regularly timed, quantile release events from SEC / Mediator interactions.  Stochastic … Continue reading

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Monday 05/02/11

10:15A – 7:00P, 7:40P – 10:00P Working on thesis: Adding enhancer section Good screencast on data management schemes: http://software-carpentry.org/4_0/data/mgmt/.  See also PLoS CB article Finish flipping Perm. Fly Stocks.  Database still needs some updates. Working on thesis pick colonies of … Continue reading

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Sunday 05/01/11

10:30 A — 6:00P Finish confocal run. Working on references for Thesis (gap-shadows work). To fix in gap shadows paper: use both , and ; separators between multiple citations.  missing captions for supplement. Rewriting text for adding enhancers MS / … Continue reading

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