Monthly Archives: January 2014

journal club 01/13/14: tech apps

Posted on January 13, 2014 by admin

Causes and effects of N-terminal codon bias (Goodman, Church and Kosuri). Science Influential approach Combine 2 Techs oligo synthesis on a programmable microarray – diverse These authors combine with next gen sequencing – 10-200 million unique sequences in a pool … Continue reading →

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Protected: lab meeting 01/13/14

Posted on January 13, 2014 by admin

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Sunday 01/12/14

Posted on January 12, 2014 by admin

4:00p – 5:20p, 5:50p – 10:30p chromatin data analysis F03, F04, F05, and BX-C data does current spit dax work correctly on 512×256 images? Or are half the frames skipped? or something worse? seems to work just fine. Ran bead … Continue reading →

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Friday, 01/10/14

Posted on January 10, 2014 by admin

9:45a – 6:15p STORM imaging – multi-color chromatin O/N imaging of F5 F6 lost focus very early in night. O/N imaging buffer also did not survive well Re-imaging F11 F12 new freshly made Glox 2.5 uL BME + 5 uL … Continue reading →

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Thursday 01/09/14

Posted on January 9, 2014 by admin

9:50a – 5:30p, 10:00p – 12:15a Goals file reimbursement paperwork for post-doc visit check to Colenso for ski trip help Sebastian design probes chromatin project Run probe design for new chromatin regions selected to test off-diagonal HiC contacts Too many … Continue reading →

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Protected: Ph project, cell variation issues

Posted on January 9, 2014 by admin

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Wednesday 01/08/14

Posted on January 8, 2014 by admin

10:00a – 5:30p, 9:30p – 11:30p Ph project Ph project model figures for Ajaz. See post Reorganized figure producing code (see Code\Results) Chromatin analysis copying F05 data over to Probox 7 Running analysis of F03 and F04 while copying data … Continue reading →

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Protected: Ph project update

Posted on January 8, 2014 by admin

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Tuesday 01/07/14

Posted on January 7, 2014 by admin

10:00a – 10:15p chromatin data collection Finish O/N STORM on F04. Transfer data from F03 and F04 to Monet start analysis of F03 and F04 data wash out stains for new BX-C regions: F05, G04 (ANTC), F03-F04-F05 combo, F05-A647 F06-A750. … Continue reading →

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Monday 01/06/13

Posted on January 6, 2014 by admin

10:00a – 11:30p Meetings lab meeting (post-doc interview). See notes post-doc chat fixing up slides for post-doc chats, moving onto google docs so that the presentation is mobile google docs having issues loading images in presentations that used to display … Continue reading →

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