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Tag Archives: probe making
Friday 10/26/12
10:20 A – 7:30PM Fly Work Set up collection cages for TRiP knockdown experiments: MTD x Psc 1 MTD x Pc 3 Set up new collection cage of MTD controls. Pc labels looked weak and Pc in situs did not … Continue reading
Thursday 10/25/12
9:50 A – 7:00P, 8:30P – 11:20 P Clean and coat coverslips washout fix from O/N fix samples, move to EtOH rehydrate, check for presence of staining. Respond to team about NSF BIRS proposal Pol I arrived 4:00 PM check … Continue reading
Posted in probe and plasmid building, Summaries
Tagged coverslips, genomics, probe making, writing
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Monday 10/22/12
9:20 A – 8:30, 9:30 – 11:10PM Flip collection cage take embryos out of 4C, final hour incubating at RT before washes. snail in situs Draq5 stained and mounted STORM / section in situs / DFISH all in secondaries at … Continue reading
Posted in probe and plasmid building, Summaries
Tagged embryo labeling, probe making, writing
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Thursday 08/02/12
9:50A — 6:20, 8:20p – 11:55P Confocal O/N — not enough sections / .17 spacing too close to make it through nuclear layer. trashed image. STORM O/N — Hal froze on movie 48. Sent crash report to Hazen. Shut down … Continue reading
Posted in Summaries
Tagged confocal, embryo collection, probe making, STORM
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Wednesday 08/01/2012
10:10 A – 7:30P, 8:20P – 10:45P Flip collection cages. Meeting with Ting and Xiaowei. KE miniprep cg5… cg10… and bxd samples. lab colonies did not grow in liquid culture? Sent samples for sequencing. STORM of Pc6_cntrl Label new dk-rb-750 … Continue reading
Posted in probe and plasmid building, Summaries
Tagged confocal, embryo collection, embryo labeling, probe making, STORM
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Tuesday 07/17/12
10:10 A – 7:00P, 8:20 P – 11:10P working on presentation for SDB teaching primer design for KE: new primers for: bxd, lab, #scr, CG5520, CG3995, CG10326, CG10324. Ordered. KE confocal of last weeks embryo staining in vitro transcription reactions … Continue reading
Tuesday 06/26/12
10:30 A -5:00P, 9:00P – 11:30P in situs day 2 short fix 2-14 hour yw and Pc embryos. rehydrate and stain 2-14 hour short fix embryos with Su(Z)12. Pc-GFP embryos also stained with ch a-GFP. vball lost. Synthesized Bac 1 … Continue reading
Posted in Summaries
Tagged embryo collection, embryo labeling, in situs, probe making, STORM analysis, writing
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Wednesday 05/09/12
12:30 P – 9:45 (volleyball practice 8:30A-11:30A) Pellet and resuspend all new probes. updated probe & plasmid database with new & resynthesized probes: [spreadsheet 0AjSqkxgziU1YdHlnZmFzOVBsX0JQUjlrQnRUWjVYVGc 600 400 sheet=1] 3x maternal Gal4 flies arrived from Perrimon lab -> start expanding coding molecule … Continue reading
Posted in probe and plasmid building, Summaries
Tagged coding, presentation, probe making
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Tuesday 05/08/12
10:00A – 10:50 P Bcd Gal4 x shRNA Pc2 and x Psc shRNA1 both still hatch larvae. Flip collection cages check mail for Perrimon Gal4 3x line – not yet arrived rerunning Pc-GFP controls with Colenso’s parameters (min height 750 … Continue reading
Posted in probe and plasmid building, Summaries
Tagged coding, images, probe making, STORM analysis
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Wednesday 04/25/12
9:45 A – 8:30 P O/N hybridization — should do in PCR block. Water evaporates from 37C block, not good contact with PCR tube. Refilled water, allow another hour of hybrdization before washes. Sequencing results: A1 = Taf1 antisense (sequence with m13F … Continue reading
Posted in probe and plasmid building, Summaries
Tagged embryo labeling, images, probe making
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