Monthly Archives: January 2012

Tuesday 01/31/12

Posted on January 31, 2012 by admin

10:00 A — 12:55 A Flip fly cages (MP08 and yw) Review JCC app. Submit JCC app. Working on snail paper final results/model section. Syncing datafiles on snail patterning sectioning: Cut 2 slides of s04(13-introns), one of slide 1, one of … Continue reading →

Posted in Summaries | Tagged , , , | Comments Off on Tuesday 01/31/12

Monday 01/30/12

Posted on January 30, 2012 by admin

10:00 A – 8:00 P Projecting snail data (MP08_20x) Fixing minor issues in JCC app from N. Francis suggestions uploading and formatting JCC app should have submitted university letter sooner, Matt helps solve. analyzing MP08 rescue data.  20x images not … Continue reading →

Posted in Summaries | Tagged , | Comments Off on Monday 01/30/12

Zhuang Lab VPN from linux

Posted on January 30, 2012 by admin

Install Remmina Remote Desktop Client (also available through Ubuntu Software Central). Download Harvard’s Cisco Client (.sh file) from: https://core-vpn-1-gw.fas.harvard.edu/CACHE/stc/4/binaries/vpnsetup.sh Alternatively follow the connect to vpn link from the Harvard vpn site.  This tries to launch a web/java version of Cisco.  If that fails to … Continue reading →

Posted in Web development | Tagged | Comments Off on Zhuang Lab VPN from linux

Sunday 01/29/12

Posted on January 29, 2012 by admin

10:30 A – 2P, 4P – 12:30A working on snail simulations finally found bug in simulation: conn_map missused – entries are width of connections, not indices of cells. configured remote connection on Linux laptop to vpn onto Monet (see post … Continue reading →

Posted in Summaries | Tagged , | Comments Off on Sunday 01/29/12

Saturday 01/28/12

Posted on January 28, 2012 by admin

11:00 A confocal O/N scans still running (22/26 embryos, started at 10 P, 35 sections, speed 5).  Extended run time until 3P. Literature search for good Drosophila Cohesin antibodies wrote to Dale Dorsett, might have Rad21 antibody to send, recontact … Continue reading →

Posted in Summaries | Tagged , , | Comments Off on Saturday 01/28/12

Protected: progress report

Posted on January 28, 2012 by admin

There is no excerpt because this is a protected post.

Posted in Research Planning | Tagged | Comments Off on Protected: progress report

Friday 01/27/12

Posted on January 27, 2012 by admin

10:00A check 750 dye-efficiencies using STORM 2 lasers.  Detailed observations recorded on Embryo_staining database. multi-histone label sample 2 looked alright by conv imaging on STORM, even 488-ftz is detectable. New microtome installed in lab, training 12-2P. Oven did not reset … Continue reading →

Posted in Summaries | Tagged , | Comments Off on Friday 01/27/12

Thursday 01/26/12

Posted on January 26, 2012 by admin

10:00 A – 7:15 P revise JCC proposal, send to Carl and DB. resin embedding of direct labeled multi-histone modification tagged embryos Finished writing new imclean GUI, orients, trims, and recolors embryos.   Updated git repo. updated JCC figure, sent … Continue reading →

Posted in Summaries | Tagged , , | Comments Off on Thursday 01/26/12

Wednesday 01/25/12

Posted on January 25, 2012 by admin

10:20 A Analyzing confocal images from testing antibodies WGA-488, H3K27me3-Cy3B (red), H3K4me3-Cy5 (blue) running LSM files through imviewer install TeXMaker on desktop working on fellowship applications BIRS proposal for 2013 5 day workshop rejected.  Contacted co-organizers to re-stratagize. Writing imviewer … Continue reading →

Posted in Summaries | Tagged , | Comments Off on Wednesday 01/25/12

Tuesday 01/24/12

Posted on January 24, 2012 by admin

10:00A – 1:00 A Finish v5 of JCC draft, sent to CB and DB. New version of figure for JCC app. 2 new sna[D] bottles for virgin collection to remake MP12 rescue line. DB MP12 flies flipped back to vial … Continue reading →

Posted in Summaries | Tagged , , , | Comments Off on Tuesday 01/24/12